BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F03SP1|AL428577
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig494 1534 0.0
>3x_Contig494
Length = 1666
Score = 1534 bits (771), Expect = 0.0
Identities = 775/779 (99%)
Strand = Plus / Plus
Query: 1 attccgaggatcccaatatggcacatgtaaacgtcacactggtgagagtattcaattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 attccgaggatcccaatatggcacatgtaaacgtcacactggtgagagtattcaattttc 581
Query: 61 atggtctcatagaacgtagagatgagtcccgatactaaatgttctacggaatggtgcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atggtctcatagaacgtagagatgagtcccgatactaaatgttctacggaatggtgcttg 641
Query: 121 agttgtaaattcttagaaagggatgggttaaagaagattaattgcaatttcttaaaggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 agttgtaaattcttagaaagggatgggttaaagaagattaattgcaatttcttaaaggca 701
Query: 181 ttcccagcaaaatggggtattagtttctcaaggacgccgtaatagttcaaaatattctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttcccagcaaaatggggtattagtttctcaaggacgccgtaatagttcaaaatattctcc 761
Query: 241 tgcacttcattggtgactagtttcgaggaaagagtattacctgaggggtaatacgaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tgcacttcattggtgactagtttcgaggaaagagtattacctgaggggtaatacgaaaga 821
Query: 301 tttggcatgaacaagatcgahcttaattgtytctctgaatgatcgttcatgtattggata 360
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 822 tttggcatgaacaagatcgatcttaattgtttctctgaatgatcgttcatgtattggata 881
Query: 361 aagctagccaacccagagctatcagcgtcgatgtagaaaatcccaccatcatcagaagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aagctagccaacccagagctatcagcgtcgatgtagaaaatcccaccatcatcagaagtc 941
Query: 421 aggtcatcgatggtgaaatcatcttctggttcgccagtaccatatttcaatttccgttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 aggtcatcgatggtgaaatcatcttctggttcgccagtaccatatttcaatttccgttta 1001
Query: 481 caaacgaaaacgataaaccttcttctgtacaactcattaacctggtttctgaccacaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 caaacgaaaacgataaaccttcttctgtacaactcattaacctggtttctgaccacaggg 1061
Query: 541 tctctmatatcacctagaacaagtagtacttgattgtcatccgtcaaatgagttggcaga 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tctctaatatcacctagaacaagtagtacttgattgtcatccgtcaaatgagttggcaga 1121
Query: 601 gcattcatcaagtaatgcgtagacgaatacaataacaatcccgcagatgtcaaacctacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gcattcatcaagtaatgcgtagacgaatacaataacaatcccgcagatgtcaaacctacc 1181
Query: 661 cctactaggagtaaaccccgatgagcccacactctgttccccatcttagagaacatgttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 cctactaggagtaaaccccgatgagcccacactctgttccccatcttagagaacatgttc 1241
Query: 721 gatgtggactctgagtgtatagcaggatcttcgtataarttggccaattcctcatctga 779
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1242 gatgtggactctgagtgtatagcaggatcttcgtataagttggccaattcctcatctga 1300
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4857
Number of Sequences: 1807
Number of extensions: 4857
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)